Vegan Blueberry Lemon Protein Muffins

Featured in: Sweet Golden Treats

These soft, tender muffins combine fresh blueberries and bright lemon zest with plant-based protein powder for a satisfying morning treat. The naturally sweetened batter uses maple syrup and applesauce for moisture, while coconut oil keeps them rich. Ready in just 37 minutes, these bake up fluffy with bursts of fruit in every bite.

Perfect for meal prep, they freeze beautifully for quick breakfasts throughout the week. The protein boost makes them extra filling, keeping you satisfied until lunch.

Updated on Wed, 11 Feb 2026 17:07:53 GMT
Twelve golden Vegan Blueberry Lemon Protein Muffins cool on a wire rack with visible zest and berries. Save
Twelve golden Vegan Blueberry Lemon Protein Muffins cool on a wire rack with visible zest and berries. | amberladle.com

There's something about the smell of lemon and blueberries baking together that stopped me mid-morning on a Tuesday when my neighbor mentioned she'd gone vegan. I'd been stress-baking through a project deadline, reaching for my usual butter-loaded muffins, when she asked if I could make something she could actually eat. That question led me to the kitchen with a handful of frozen blueberries, a lemon I'd been meaning to use, and the realization that "vegan" didn't have to mean giving up the fluffy, tender muffins I loved. These turned out so good that I started making them for myself, protein powder and all.

I made a batch for my partner's coworkers once and watched the blueberries disappear in minutes—one person asked if they were "actually vegan" because they couldn't believe the texture. That's when I knew these weren't just a compromise for dietary restrictions; they were legitimately delicious muffins that happened to fit into a plant-based lifestyle.

Ingredients

  • All-purpose flour: The backbone of your muffin structure, though whole wheat pastry flour works beautifully if you want a slightly earthier taste and a bit more nutrition.
  • Vegan vanilla protein powder: This isn't about gym rat vibes—it adds structure and keeps the crumb tender while bumping up the protein content so you stay fuller longer.
  • Baking powder and baking soda: Work together to create that signature fluffy lift; don't skip either one or you'll end up with hockey pucks.
  • Unsweetened almond milk: Any plant milk works, though almond gives a subtle nuttiness that plays well with lemon.
  • Melted coconut oil: This is what keeps these muffins impossibly moist without dairy butter; neutral oil works too if you want to skip the coconut flavor.
  • Maple syrup: Provides natural sweetness and a light caramel note that deepens during baking without making things overly sweet.
  • Applesauce: Sounds like a supporting player, but it's actually crucial for moisture and binding—it lets you use less oil while keeping everything tender.
  • Fresh lemon zest and juice: These are non-negotiable; the zest gives brightness while the juice adds tartness that balances the sweetness and makes the blueberries sing.
  • Fresh or frozen blueberries: Frozen berries work as well as fresh and won't bleed into the batter if you don't thaw them—I learned this the hard way with a purple-tinged disaster.

Instructions

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Set up your space:
Preheat your oven to 350°F and line your muffin tin with paper liners—this step takes thirty seconds but saves you from scraping batter later. A greased tin works fine too if you want to skip the papers.
Mix your dry team:
In a large bowl, whisk together the flour, protein powder, baking powder, baking soda, and salt until there are no lumps hiding anywhere. This ensures the leavening agents distribute evenly so each muffin rises at the same pace.
Combine the wet magic:
In a separate bowl, whisk together the almond milk, melted coconut oil, maple syrup, applesauce, vanilla, lemon zest, and lemon juice until the mixture is smooth and well combined. This is where the flavor happens, so taste it if you want to adjust the lemon.
Bring it together:
Pour the wet ingredients into the dry bowl and stir gently until just combined—this is the critical moment where overmixing turns fluffy muffins into tough ones. Stop as soon as you don't see flour streaks; lumps are your friend here.
Fold in the berries:
Gently fold the blueberries into the batter using a spatula, being careful not to crush them or stir too vigorously. If they're frozen, use them straight from the freezer to prevent them from bleeding color throughout.
Fill your cups:
Divide the batter evenly among the muffin cups, filling each about three-quarters full to allow room for rise without overflow. A small ice cream scoop makes this task neat and fair.
Bake with intention:
Slide the tin into the oven and bake for 20 to 22 minutes, until a toothpick inserted into the center comes out clean or with just a few crumbs clinging to it. The tops should be lightly golden and spring back when you touch them gently.
Cool with patience:
Let the muffins sit in the tin for about 5 minutes so they firm up slightly, then turn them out onto a wire rack to cool completely. This prevents them from steaming themselves into sogginess.
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Mix batters, prep ingredients, grate vegetables, and store leftovers easily during baking and everyday cooking.
Check price on Amazon
Fluffy Vegan Blueberry Lemon Protein Muffins displayed alongside a glass of almond milk for a healthy snack. Save
Fluffy Vegan Blueberry Lemon Protein Muffins displayed alongside a glass of almond milk for a healthy snack. | amberladle.com
Fluffy Vegan Blueberry Lemon Protein Muffins displayed alongside a glass of almond milk for a healthy snack. Save
Fluffy Vegan Blueberry Lemon Protein Muffins displayed alongside a glass of almond milk for a healthy snack. | amberladle.com

One rainy afternoon, I taught my sister how to make these while she worked through a stressful week, and watching her relax while folding in blueberries reminded me that sometimes food is less about nutrition and more about the quiet moments we create around it. These muffins became our thing—something she'd text me about asking to make, and that connection felt bigger than the recipe itself.

Flavor Balance and Why It Matters

The lemon and blueberry combination is classic for a reason—the tartness of the citrus cuts through the sweetness of the berries and maple syrup, preventing the muffins from tasting cloying. The protein powder might sound like it would flatten the flavor, but vanilla protein actually complements these notes beautifully without adding any metallic taste. I once tried cutting back the lemon juice to save a half-squeezed lemon, and the muffins immediately tasted one-dimensional, so trust the recipe on this one.

Storage and Freezing Wisdom

These muffins keep for up to five days in an airtight container at room temperature, though they're best eaten within the first two days when they're still tender. For longer storage, freeze them individually wrapped in parchment paper inside a freezer bag—they thaw beautifully at room temperature in about an hour and taste almost as fresh as when they came out of the oven. I've thawed mine in the microwave for 30 seconds when I'm in a rush, and they come back to life surprisingly well.

Customization Without Losing the Magic

While the recipe is solid as written, there's room to play around once you understand why each ingredient is there. Swapping whole wheat pastry flour adds nuttiness but might need a tiny splash more liquid, and experimenting with different plant-based protein powders (pea, soy, or brown rice) changes the flavor subtly but won't ruin anything. If you want an extra lemon punch, add another teaspoon of zest, and if you're less wild about citrus, use just the juice without the zest.

  • You can fold in poppy seeds alongside the blueberries for a traditional lemon poppy flavor if you want to shift the vibe.
  • Try adding a tiny pinch of turmeric or cardamom if you're feeling adventurous—both play well with blueberry and lemon without being obvious.
  • Fresh raspberries, blackberries, or even diced strawberries work in place of blueberries, though you might want to toss them in a tiny bit of flour to prevent sinking.
Freshly baked Vegan Blueberry Lemon Protein Muffins with cracked tops and juicy blueberries bursting from the crust. Save
Freshly baked Vegan Blueberry Lemon Protein Muffins with cracked tops and juicy blueberries bursting from the crust. | amberladle.com
Freshly baked Vegan Blueberry Lemon Protein Muffins with cracked tops and juicy blueberries bursting from the crust. Save
Freshly baked Vegan Blueberry Lemon Protein Muffins with cracked tops and juicy blueberries bursting from the crust. | amberladle.com

These muffins became my answer to the question "what can you make that's actually delicious?" when friends were shifting their eating habits. They're proof that vegan baking isn't about sacrifice; it's about understanding ingredients and respecting the science a little.

Recipe FAQs

Can I use frozen blueberries?

Yes, frozen blueberries work perfectly. Add them directly from the freezer without thawing to prevent excess moisture in the batter. Baking time may increase by 1-2 minutes.

What protein powder works best?

Vanilla pea or soy protein blends provide the best texture. Whey-based powders aren't suitable for vegan versions. Unflavored powder can be used if you prefer less sweetness.

How should I store these?

Keep in an airtight container at room temperature for 3 days, or refrigerate for up to a week. For longer storage, wrap individually and freeze for up to 2 months.

Can I make these gluten-free?

Substitute the all-purpose flour with a 1:1 gluten-free baking blend. Check that your protein powder is certified gluten-free as well.

Why use applesauce in muffins?

Unsweetened applesauce adds natural moisture and sweetness while reducing the amount of oil needed. It creates a tender crumb without making the muffins dense.

Can I reduce the sweetness?

You can decrease the maple syrup to 1/3 cup. The blueberries and applesauce provide natural sweetness, though the muffins will be less sweet overall.

Vegan Blueberry Lemon Protein Muffins

Moist vegan muffins with blueberries, lemon zest, and plant protein for a nutritious breakfast or snack.

Prep time
15 min
Cook time
22 min
Overall time
37 min
Created by Rachel Hayes


Skill required Easy

Cuisine American

Makes 12 Serving size

Diet preferences Plant-based, No dairy

What you need

Dry Ingredients

01 2 cups all-purpose flour
02 1 scoop vegan vanilla protein powder
03 1 tablespoon baking powder
04 1/2 teaspoon baking soda
05 1/4 teaspoon salt

Wet Ingredients

01 3/4 cup unsweetened almond milk
02 1/3 cup melted coconut oil
03 1/2 cup maple syrup
04 1/4 cup unsweetened applesauce
05 2 teaspoons pure vanilla extract
06 Zest of 1 large lemon
07 2 tablespoons fresh lemon juice

Fold-Ins

01 1 1/2 cups fresh or frozen blueberries

How to make it

Step 01

Prepare Muffin Tin: Preheat oven to 350°F. Line a 12-cup muffin tin with paper liners or lightly grease each cup.

Step 02

Combine Dry Ingredients: In a large mixing bowl, whisk together flour, protein powder, baking powder, baking soda, and salt until evenly distributed.

Step 03

Mix Wet Ingredients: In a separate bowl, combine almond milk, melted coconut oil, maple syrup, applesauce, vanilla extract, lemon zest, and lemon juice. Whisk until smooth and well incorporated.

Step 04

Combine Wet and Dry: Pour wet ingredients into the dry mixture and stir gently until just combined. Do not overmix; a few lumps are acceptable.

Step 05

Fold in Blueberries: Gently fold blueberries into the batter using a spatula or wooden spoon.

Step 06

Fill Muffin Cups: Distribute batter evenly among the prepared muffin cups, filling each approximately 3/4 full.

Step 07

Bake: Bake for 20 to 22 minutes, or until a toothpick inserted into the center of a muffin comes out clean.

Step 08

Cool: Allow muffins to cool in the tin for 5 minutes, then transfer to a wire rack to cool completely.

Equipment needed

  • 12-cup muffin tin
  • Mixing bowls
  • Whisk
  • Measuring cups and spoons
  • Grater or zester
  • Wire cooling rack

Allergy info

Always review ingredients for allergens. Talk to your healthcare provider if you're unsure.
  • Contains wheat and gluten
  • May contain tree nuts if using almond milk or coconut oil
  • Use certified gluten-free flour and nut-free plant milk alternatives for dietary restrictions

Nutrition details (each serving)

Nutritional details are for reference and aren't a substitute for healthcare guidance.
  • Calorie Count: 160
  • Fat content: 5 g
  • Carbohydrate: 24 g
  • Protein amount: 5 g